BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D06LP1|AL427755
(982 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig214 1296 0.0
3x_Contig1485 378 e-104
>3x_Contig214
Length = 1381
Score = 1296 bits (651), Expect = 0.0
Identities = 661/667 (99%)
Strand = Plus / Plus
Query: 306 tatattcgaagaaggtttatgagttgatggctgagttacctgtgcctgawatcaaaaggg 365
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 26 tatattcgaagaaggtttatgagtcgatggctgagttacctgtgcctgaaatcaaaaggg 85
Query: 366 tgactttagaatctttgtatttatcagtaagatccatgggcataaaawacgttactaagt 425
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 86 tgactttagaatctttgtatttatcagtaagatccatgggcataaaaaacgttactaagt 145
Query: 426 ttttacagcaaggcctagacccgccgcctttatcctcgttggaaaaagcagagcaaatat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ttttacagcaaggcctagacccgccgcctttatcctcgttggaaaaagcagagcaaatat 205
Query: 486 taactacgacaggactaattgatgaaacagacaacacgttaacacagctaggtaagtttg 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 taactacgacaggactaattgatgaaacagacaacacgttaacacagctaggtaagtttg 265
Query: 546 tgagcttgctacctgtcatggatagcaaacatggtaaactattgattttttctatcctgt 605
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgagcttgctacctggcatggatagcaaacatggtaaactattgattttttctatcctgt 325
Query: 606 ttggttgcaccgacataggtgtgttaattgcctcactattaagcgttggaacctctatat 665
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ttggttgcaccgacataggtgtgttaattgcctcactattaagcgttggaacctctatat 385
Query: 666 ttatcaatgagtatgaaaatagagtcgcaatcagggaaatacttgttgagaatgaaaatc 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttatcaatgagtatgaaaatagagtcgcaatcagggaaatacttgttgagaatgaaaatc 445
Query: 726 taggtgatgttttagcagtcgttctcttgcttaataaatatatcaaccttgaaggcgcca 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 taggtgatgttttagcagtcgttctcttgcttaataaatatatcaaccttgaaggcgcca 505
Query: 786 gtwaacgtaaatttttgaaagatcatcttttatcttacaataaggttactgaaattatgt 845
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtaaacgtaaatttttgaaagatcatcttttatcttacaataaggttactgaaattatgt 565
Query: 846 cttcaaggacacagttttactccaacttgaaggatataggttttttaccattcgattata 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 cttcaaggacacagttttactccaacttgaaggatataggttttttaccattcgattata 625
Query: 906 agcctggtaatacctcatctgaattccttaaccgcaatgccggcaatttcgaaatattga 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 agcctggtaatacctcatctgaattccttaaccgcaatgccggcaatttcgaaatattga 685
Query: 966 agtkcgt 972
||| |||
Sbjct: 686 agtgcgt 692
>3x_Contig1485
Length = 9830
Score = 378 bits (190), Expect = e-104
Identities = 202/206 (98%), Gaps = 1/206 (0%)
Strand = Plus / Plus
Query: 1 aaagctgattctgactccttgttcgarattttaccattgcattccgctttaactcctgat 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 9610 aaagctgattctgactccttgttcgagattttaccattgcattccgctttaactcctgat 9669
Query: 61 gatcaaaagagagttttcaaaaaatatcaaatccagaagaaagataataatttcaactaa 120
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9670 gatcaaaagagagtcttcaaaaaat-tcaaatccagaagaaagataataatttcaactaa 9728
Query: 121 cattgctgaaacttccatcactgttgatgactgtkttgctaccattgacaccggtcgtgt 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 9729 cattgctgaaacttccatcactgttgatgactgtgttgctaccattgacaccggtcgtgt 9788
Query: 181 taaaacattaaattacgatccttcca 206
||||||||||||||||||||||||||
Sbjct: 9789 taaaacattaaattacgatccttcca 9814
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7800
Number of Sequences: 1807
Number of extensions: 7800
Number of successful extensions: 52
Number of sequences better than 1.0e-20: 2
length of query: 982
length of database: 10,358,551
effective HSP length: 16
effective length of query: 966
effective length of database: 10,329,639
effective search space: 9978431274
effective search space used: 9978431274
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)